Eric J. Sorin and Vijay S. Pande. Biophysical Journal (2005) SUMMARY: How good are our models for folding? This question is important to address in order to understand the usefulness…
Read moreEric J. Sorin, Young Min Rhee, and Vijay S. Pande. Biophysical Journal (2005) SUMMARY: While previous studies on the folding of nucleic acid hairpins have employed simplified models of either…
Read moreLillian T. Chong, Christopher D. Snow, Young Min Rhee, and Vijay S. Pande. Journal of Molecular Biology (2005) SUMMARY: Roughly half of all known cancers result from mutations in p53.…
Read moreNina Singhal, Christopher D. Snow, and Vijay S. Pande. Journal of Chemical Physics (2004) SUMMARY: How can Folding@home use thousands to millions of CPUs to efficiently simulate long timescale biomolecular…
Read moreYoung Min Rhee, Eric J. Sorin, Guha Jayachandran, Erik Lindahl, & Vijay S Pande. Proceedings of the National Academy of Sciences (2004) ABSTRACT: There are many unresolved questions regarding the…
Read moreChristopher D. Snow, Linlin Qiu, Deguo Du, Feng Gai, Stephen J. Hagen, & Vijay S Pande. Proceedings of the National Academy of Sciences (2004) ABSTRACT: We studied the microsecond folding…
Read moreEric J. Sorin, Bradley J. Nakatani, Young Min Rhee, Guha Jayachandran, V Vishal, & Vijay S Pande. Journal of Molecular Biology (2004) ABSTRACT: Recent studies in protein folding suggest that…
Read moreBojan Zagrovic & Vijay S Pande. Nature Structural Biology (2003) ABSTRACT: Recently, we have proposed that, on average, the structure of the unfolded state of small, mostly alpha-helical proteins may…
Read moreMichael R. Shirts, Eric Bair, Giles Hooker, and Vijay S Pande. Physical Review Letters (2003) ABSTRACT: We present a maximum likelihood argument for the Bennett acceptance ratio method, and derive…
Read moreMichael R. Shirts, Jed W. Pitera, William C. Swope, and Vijay S. Pande. Journal of Chemical Physics (2003) ABSTRACT: Quantitative free energy computation involves both using a model that is…
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